Jean Manguy, PhD

Postdoctoral researcher in Bioinformatics interested by odd proteins, evolution, reproducible data analysis, and software development.

Shields Lab

UCD Conway Institute


  • Protein sequence analysis
  • Evolution
  • Peptidomics
  • Programming
  • Data analysis
  • Data visualization
  • Reproducibility


  • PhD in Bioinformatics, 2019

    University College Dublin, Dublin, Republic Of Ireland

  • MSc in Bioinformatics, 2015

    Université de Nantes, Nantes, France

  • BSc in Biology, 2013

    Université de Nîmes, Nîmes, France

  • Advanced technician certificate in Biotechnologies, 2011

    Lycée Marie Curie, Marseille, France

Recent Posts


Introducing a new tool to convert and combine Kraken reports

I started to learn Rust

Earlier this year I set up to learn a new programming language. I started to learn Rust.

Subtrees as triangles with ggtree

how to draw triangles with ggtree and ggplot.

Introduction to ggplot2 and to ggtree

Hi everyone, That’s the first tutorial I write, I will assume you know some basis of R. I try to write more to improve my writing for my PhD and for myself as English is not my native language.

Recent Publications

(2016). Peptigram: A Web-Based Application for Peptidomics Data Visualization. In Journal of Proteome Research.

PDF Web server DOI

(2016). ProViz—a web-based visualization tool to investigate the functional and evolutionary features of protein sequences. In Nucleic Acids Research.

Web server DOI